Structure of Glycoprotein and Carbohydrate Chain
[ Japanese version ]


1a4g (Chain A) [PDB]
1afa [PDB]
1agm [PDB]
1aoz (Chain A) [PDB]
1ax0 [PDB]
1azx [PDB]
1bhg (Chain A) [PDB]
1btc* [PDB]
1bzb [PDB]
1c58 (Chain A) [PDB]
1cap [PDB]
1ckl*  |  Chain A-C Select Asn49,Asn80 (Chain A-C) [PDB]
1cqf [PDB]
1ct1 [PDB]
1cvi* [PDB]
1cvn (Chain A) [PDB]
1cvu [PDB]
1cxf [PDB]
1cxk [PDB]
1d1k [PDB]
1d3c [PDB]
1d7w (Chain A,C) [PDB]
1dan [PDB]
1dbn (Chain A) [PDB]
1dbo [PDB]
1dn2* [PDB]
1dog [PDB]
1dp5* [PDB]
1dpj* [PDB]
1e03* [PDB]
1e05* [PDB]
1e0o* [PDB]
1e4k [PDB]
1e71* [PDB]
1f6a [PDB]
1f88 (Chain A) [PDB]
1fc1 Select Asn297 (Chain A,B) [PDB]
1fcp* [PDB]
1fcv* [PDB]
1fi1* [PDB]
1fih [PDB]
1frt [PDB]
1fv3 (Chain B) [PDB]
1fzc (Chain A,B,C,G,I) [PDB]
1g0v* [PDB]
1g1r [PDB]
1g1t [PDB]
1g9j [PDB]
1g9m [PDB]
1gah Select acarbose [PDB]
1gai* [PDB]
1gca [PDB]
1glm [PDB]
1gpe [PDB]
1gya (Model 1) Select Asn65 [PDB]
1gzw [PDB]
1h3v* [PDB]
1h3x* [PDB]
1h3y [PDB]
1h4p (Chain A)* [PDB]
1hd4 (Model 1) [PDB]
1hgg [PDB]
1hm2 [PDB]
1i1a* [PDB]
1i1c [PDB]
1igy [PDB]
1iis* [PDB]
1iix [PDB]
1ing (Chain A)* [PDB]
1inh (Chain A) [PDB]
1iny [PDB]
1j8r [PDB]
1jso [PDB]
1kj2* [PDB]
1kjl [PDB]
1ken (Chain A-F) [PDB]
1l6x* [PDB]
1l7f [PDB]
1lgb [PDB]
1lgc* [PDB]
1loh [PDB]
1lte* [PDB]
1ltj (Chain A,B,C,G,H) [PDB]
1ltt (Chain D-H) [PDB]
1lxm* [PDB]
1lzj [PDB]
1m1j[PDB]
1m5m* [PDB]
1mco [PDB]
1mhl (Chain A,C) [PDB]
1mw0 [PDB]
1mwe* [PDB]
1n1f [PDB]
1n7q [PDB]
1n7r [PDB]
1nq9* [PDB]
1o7d* [PDB]
1op5 [PDB]
1oqo* [PDB]
1p2g* [PDB]
1p8j [PDB]
1ppi [PDB]
1q5b [PDB]
1qff* [PDB]
1qfo (Chain A) [PDB]
1qfu* [PDB]
1qjq [PDB]
1qnu [PDB]
1rne [PDB]
1slt (Chain A) [PDB]
1sr5* [PDB]
1t83* [PDB]
1t89 [PDB]
1tb6* [PDB]
1tyw* [PDB]
1ulf [PDB]
1vfu (Chain A) [PDB]
1vsg* Select Asn263 (Chain A,B) [PDB]
1xhb [PDB]
1xmn [PDB]
1yy9* [PDB]
1z2r (Chain A,B) [PDB]
1z32 [PDB]
1z6i [PDB]
1zag* [PDB]
2b5t [PDB]
2b8h [PDB]
2bf1 [PDB]
2bvk [PDB]
2chb [PDB]
2cn3 (Chain A) [PDB]
2d0g [PDB]
2dtw [PDB]
2dty [PDB]
2dvc [PDB]
2fcp* [PDB]
2h6o [PDB]
2i5y (Chain G,H,L,M) [PDB]
2msb (Chain B) [PDB]
2qwk [PDB]
3gbp [PDB]
3gly [PDB]
3hya* [PDB]
3pqr* [PDB | Kawakami Model (Japanese)]


Monosaccharides:  Gal (β-D-galactose)  | -Glc (β-D-glucose)  | Man (β-D-mannose)  | Fuc (α-L-fucose) )  | Xyl (β-D-xylose)  | Sia (ex. N-acetylneuraminic acid)  | GalNAc (N-acetyl-D-galactosamine)  | GlcNAc (N-acetyl-D-glucosamine)  | GlcA (β-D-glucuronic acid)  || All 9 Molecules

Backbone  Secondary Structure
Select All  Select Protein  Select DNA/RNA   Select Backbone of DNA/RNA  Select Ligands   (*) 
Spacefill  Ball & Stick (20%)   (30%)   Sticks  Wireframe |   
'Amino' colors  CPK colors | Jmol colors  Rasmol colors | Dark Red Dark Blue Green Light Blue Purple
Colored Monosaccharides (Gal, -Glc, -Glc, Man, Fuc, Xyl, Sia, GalNAc, GlcNAc, GlcA) | Select Asn  Select Ser  Select Thr
Acidic/Neutral/Basic  Polar/Hydrophobic  Hydropathy Index  I/O  pI  Conformational Preferences (α-helix, β-strand#
Hydrogen Bonds (Bold Line)   OFF |   
Background Black  Gray  White
    'Amino' colors
      ASP  GLU  CYS  MET  LYS  ARG  SER  THR  PHE  TYR
      ASN  GLN  GLY  LEU  VAL  ILE  ALA  TRP  HIS  PRO

    -- See Amino Acid Properties --
    Acidic, Neutral [Aromatic], Basic

      ASP  GLU  GLY  ALA  VAL  LEU  ILE  CYS  SER  THR
      ASN  GLN  PRO  MET
        PHE  TYR  TRP  LYS  ARG  HIS
    Polar [Acidic, Basic], Nonpolar (Hydrophobic) 
      SER  THR  TYR  CYS  ASN  GLN  ASP  GLU  LYS  ARG
      HIS
        GLY  ALA  VAL  LEU  ILE  PHE  PRO  MET  TRP
    Hydropathy Index
      ARG  LYS  ASN  ASP  GLN  GLU  HIS  PRO  TYR  TRP
      SER  THR  GLY
        ALA  MET  CYS  PHE  LEU  VAL  ILE
    I/O
      ASN  SER  ASP  GLN  GLU  THR  ARG  HIS  GLY  LYS
      TYR  TRP
        CYS  MET  PRO  PHE  ALA  VAL  LEU  ILE
    pI
      ASP  GLU  CYS  ASN  PHE  GLN  TYR  SER  MET  TRP
      VAL  GLY  LEU
        ALA  ILE  THR  PRO  HIS  LYS  ARG




α-D-galactose




1fc1 (Asn297)



1cqf (Asn)



1gah (Asn, Ser, Thr)



1loh (Hyaluronate Lyase)


hyaluronic acid (-[-GlcA-GlcNAc-]-n)



1mhl (Chain A, C)



1bhg (Chain A)



2z55 (Chain A)



3pqr | Kawakami Model (Japanese) | GPCR(Japanese)


  
1hgg



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